Comparative Evaluation of Multispectral UAV-Derived Vegetation Indices in Rice Fields
DOI:
https://doi.org/10.20527/actasolum.v4i3.3645Keywords:
Precision agriculture, Rice crop health, Soil–plant system, UAV multispectral, Vegetation indicesAbstract
This study presents a comparative evaluation of multispectral UAV-derived vegetation indices (VIs) in rice fields. Seven UAV-derived VIs — the Chlorophyll Index (CI), Chlorophyll Vegetation Index (CVI), Modified Soil-Adjusted Vegetation Index (MSAVI), Green Normalized Difference Vegetation Index (GNDVI), Normalized Difference Red Edge Index (NDRE), Normalized Difference Vegetation Index (NDVI), and Perpendicular Vegetation Index (PVI) were computed from UAV multispectral orthomosaics acquired over a lowland rice field in Purwokerto, Central Java. The data were collected during the late vegetative stage of rice growth. Pearson correlation analysis showed strong positive correlations between the structural indices NDVI, MSAVI, and PVI (r > 0.93) and the chlorophyll-related indices CI and NDRE (r = 0.93), whereas CVI was negatively correlated with NDRE (r = −0.66), indicating that biomass accumulation and chlorophyll status did not always change together. Forty-three field points, classified into rice condition categories, were used to train and test a Random Forest classifier. Both models reached the same overall test accuracy of 63.64% (Kappa = 0.42 and 0.41, respectively), and the cross-validated model reached a cross-validation Kappa of 0.48 at mtry = 7. Variable importance ranked PVI as by far the most influential predictor (importance = 100), followed at a distance by CI (18.4), NDRE (12.9), and CVI (9.5), while MSAVI, NDVI, and GNDVI contributed little. Soil-background-sensitive PVI carried the strongest discriminative signal, chlorophyll-related indices added complementary information, and GNDVI was largely redundant. These findings offer preliminary evidence that PVI, paired with CI or NDRE, is the most relevant index combination for UAV-based rice field assessment.
References
Badan Pusat Statistik. 2024. Produksi Padi Menurut Kabupaten/Kota di Provinsi Jawa Tengah Tahun 2023. Badan Pusat Statistik Provinsi Jawa Tengah. Retrieved from https://jateng.bps.go.id/en (in Indonesia)
Chen, A., Orlon-Levin, V., Meron, M. 2019. Applying high-resolution visible-channel aerial imaging of crop canopy to precision irrigation management. Agricultural Water Management 216, 196-205. https://doi.org/10.1016/j.agwat.2019.02.017
Gregorutti, B., Michel, B., Saint-Pierre, P. 2017. Correlation and variable importance in random forests. Statistics and Computing 27(3), 659–678. https://doi.org/10.1007/s11222-016-9646-1
Haboudane, D., Miller, J.R., Pattey, E., Zarco-Tejada, P.J., Strachan, I.B. 2004. Hyperspectral vegetation indices and novel algorithms for predicting green LAI of crop canopies: Modeling and validation in the context of precision agriculture. Remote Sensing of Environment 90(3), 337–352. https://doi.org/10.1016/j.rse.2003.12.013
Huete, A.R. 1988. A soil-adjusted vegetation index (SAVI). Remote Sensing of Environment 25(3), 295–309. https://doi.org/10.1016/0034-4257(88)90106-X
Kanke, Y., Tubana, B., Dalen, M., Harrell, D. 2016. Evaluation of red and red edge reflectance-based vegetation indices for rice biomass and grain yield prediction models in paddy fields. Precision Agriculture 17(5), 507–530. https://doi.org/10.1007/s11119-016-9433-1
Khose, S.B., Mailapalli, D.R. 2024. UAV-based multispectral image analytics and machine learning for predicting crop nitrogen in rice. Geocarto International 39(1), 2373867. https://doi.org/10.1080/10106049.2024.2373867
Liu, W., Zhang, A. 2025. Plant disease detection algorithm based on efficient swin transformer. Computers, Materials and Continua 82(2), 3045-3068. https://doi.org/10.32604/cmc.2024.058640
Liu, Z., Ju, H., Ma, Q., Sun, C., Lv, Y., Liu, K., Wu, T., Cheng, M. 2024. Rice yield estimation using multi-temporal remote sensing data and machine learning: A case study of Jiangsu, China. Agriculture 14(4), 638. https://doi.org/10.3390/agriculture14040638
Marino, S., Alvino, A. 2021. Vegetation indices data clustering for dynamic monitoring and classification of wheat yield crop traits. Remote Sensing 13(4), 541. https://doi.org/10.3390/rs13040541
Nitu, A., Florea, C., Ivanovici, M., Racoviteanu, A. 2025. NDVI and beyond: Vegetation indices as features for crop recognition and segmentation in hyperspectral data. Sensors 25(12), 3817. https://doi.org/10.3390/s25123817
Norasma, C.Y.N., Fadzilah, M.A., Roslin, N.A., Zanariah, Z.W.N., Tarmidi, Z., Candra, F.S. 2019. Unmanned aerial vehicle applications in agriculture. IOP Conference Series: Materials Science and Engineering 506, 012063. https://doi.org/10.1088/1757-899X/506/1/012063
Qi, J., Chehbouni, A., Huete, A.R., Kerr, Y.H., Sorooshian, S. 1994. A modified soil adjusted vegetation index. Remote Sensing of Environment 48(2), 119-126. https://doi.org/10.1016/0034-4257(94)90134-1
Shang, J., Liu, J., Poncos, V., Geng, X., Qian, B., Chen, Q., Dong, T., Macdonald, D., Martin, T., Kovacs, J., Walters, D. 2015. Detection of crop seeding and harvest through analysis of time-series Sentinel-1 interferometric SAR data. Remote Sensing 7(4), 3826–3844. https://doi.org/10.3390/rs12101551
Siegfried, J., Adams, C.B., Rajan, N., Hague, S., Schnell, R., Hardin, R. 2023. Combining a cotton ‘Boll Area Index’ with in-season unmanned aerial multispectral and thermal imagery for yield estimation. Field Crops Research 291, 108765. https://doi.org/10.1016/j.fcr.2022.108765
Strobl, C., Boulesteix, A.-L., Kneib, T., Augustin, T., Zeileis, A. 2008. Conditional variable importance for random forests. BMC Bioinformatics 9, 307. https://doi.org/10.1186/1471-2105-9-307
Taskos, D.G., Koundouras, S., Stamatiadis, S., Zioziou, E., Nikolaou, N., Karakioulakis, K., Theodorou, N. 2015. Using active canopy sensors and chlorophyll meters to estimate grapevine nitrogen status and productivity. Precision Agriculture 16(1), 77–98. https://doi.org/10.1007/s11119-014-9363-8
Towers, P.C., Strever, A., Poblete-Echeverría, C. 2019. Comparison of vegetation indices for leaf area index estimation in vertical shoot positioned vine canopies with and without protective hail netting. Remote Sensing 11(9), 1073. https://doi.org/10.3390/rs11091073
Wijayanto, A.K., Junaedi, A., Sujaswara, A.A., Khamid, M.B.R., Prasetyo, L.B., Hongo, C., Kuze, H. 2023. Machine learning for precise rice variety classification in tropical environments using UAV-based multispectral sensing. AgriEngineering, 5(4), 2000–2019. https://doi.org/10.3390/agriengineering5040123
Yan, J., Wu, H., Diao, Z., Miao, Y., Zhang, B., Zhao, C. 2026. Recent developments and applications of crop disease detection, prediction, and early warning: A review. Engineering 62, 316-340. https://doi.org/10.1016/j.eng.2025.10.032
Yanti, D., Khoirunnisa, S., Rusnam, Stiyanto, E. 2022. Estimation of rice productivity using the normalized difference vegetation index (NDVI) algorithm (Case study of Gunung Talang district, Solok Regency). Jurnal Keteknikan Pertanian 10(3), 241–253. https://doi.org/10.19028/jtep.010.3.240-252
Yao, H., Qin, R., Chen, X. 2019. Unmanned aerial vehicle for remote sensing applications — A review. Remote Sensing 11(12), 1443. https://doi.org/10.3390/rs11121443
Zarco-Tejada, P.J., Guillen-Climent, M.L., Hernández-Clemente, R., Catalína, A., González, M.R., Martín, P. 2014. Estimating leaf carotenoid content in vineyards using high resolution hyperspectral imagery acquired from an unmanned aerial vehicle (UAV). Agricultural and Forest Meteorology 171–172, 281–294. https://doi.org/10.1016/j.agrformet.2012.12.013
Zhang, C., Kovacs, J.M. 2012. The application of small unmanned aerial systems for precision agriculture: A review. Precision Agriculture 13(6), 693–712. https://doi.org/10.1007/s11119-012-9274-5
Downloads
Published
How to Cite
Issue
Section
License
Copyright (c) 2026 Hana Hanifa, Zulfa Az Zahroh, Mohamad Zaki Alfatih

This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.













