Keragaman Jamur Mikoriza Arbuskular pada Rizosfer Tiga Varietas Tanaman Tebu
Diversity of Arbuscular Mycorrhizal Fungi in the Rhizosphere of Three Sugarcane Varieties
DOI:
https://doi.org/10.20527/actasolum.v3i2.3293Keywords:
Arbuscular mychorrhizal fungi, Identification, Nested Polymerase Chain Reaction, Rhizosphere, SugarcaneAbstract
Arbuscular mycorrhizal fungi (AMF) form associations with more than 80% of the terrestrial plants. These associations enhance nutrient sequestration and plant resistance to environmental stress. The diversity of AMF is highly influenced by the host plants. The types of AMF in the Bululawang, Kidang Kencana, and Pasuruan Jengkol 922 sugarcane varieties grown in a similar location were identified through morphological and molecular methods. AMF spores were isolated by the wet sieving method. The morphological features of the AMF spore mounted in PVLG and Melzer’s reagent were observed under a microscope. The DNA of the fungi was extracted, and the ribosomal RNA genes were amplified by nested PCR with the NS1-NS4 primer pairs, followed by the AML1-AML2 primer pairs. A moderate diversity of AMF was observed, with a total of 269 spores found in the Kidang Kencana variety, 191 spores in the Bululawang variety, and 142 spores in the Pasuruan Jengkol 922 variety. Four AMF species have been identified morphologically and molecularly, namely Glomus flavisporum, Acaulospora koskei, Gigaspora Margarita, and Scutellospora savannicola. These findings indicate that the number and type of AMF associated with sugarcane roots are influenced by plant varieties, in which the Glomus sp. is the dominant species in the three sugarcane varieties studied.
References
Al-Hinai, A., Janke, R., Sieverding, E., Farooq, M., Menezes-Blackburn, D. 2025. Identification and characterization of native arbuscular mycorrhizal fungi in plants growing under organic and conventional farming conditions in Oman. Soil and Environmental Health 3(2), 100140. https://doi.org/10.1016/j.seh.2025.100140
Arofatullah, N.A., Kabirun, S., Fujiyama, K., Widianto, D. 2019. Molecular identification and in vitro propagation of arbuscular mycorrhiza from tea plant rhizosphere. Current Research in Environmental and Applied Mycology 9(1), 92–102. https://doi.org/10.5943/cream/9/1/10
Astuti, A., Mulyono, Haryono, Putri, A.E. 2020. Compatibility and effectivity of various mycorrhizal sources with cassava varieties in Gunungkidul. IOP Conference Series: Earth and Environmental Science 458(1). https://doi.org/10.1088/1755-1315/458/1/012005
Diédhiou, A.G., Borges, W.L., Sadio, O., de Faria, S.M. 2014. Assessment of DNA extraction methods for detection of arbuscular mycorrhizal fungi in plant roots by nested-PCR. Acta Scientiarum - Biological Sciences 36(4), 433–441. https://doi.org/10.4025/actascibiolsci.v36i4.21689
Green, M.R., Sambrook, J. 2019. Nested polymerase chain reaction (PCR). Cold Spring Harbor Protocols 2019(2), 175–179. https://doi.org/10.1101/pdb.prot095182
Halimah L.S. 2019. Identifikasi dan karakterisasi mikoriza pada tegakan nyatoh (Palaquium sp.) identification and characterization of mycorrhizae on nyatoh (Palaquium sp.) stands. Jurnal Perennial 15(1), 51–57. Retrivied from http://journal.unhas.ac.id/index.php/perennial
INVAM. 2025. Acaulosporaceae Gerd. & Trappe. The University of Kansas. Retrivied from https://invam.ku.edu/acaulosporaceae
Kang, Y.H., Jiang, S.T., Wang, Q., Nong, Y.J., Song, J., Li, D.P., Wen, Y.Y., Xu, J., Chen, T.S., Zhang, J.L., Li, Y.R. 2024. Response of soil arbuscular mycorrhizal fungal community to chemical fertilization in sugarcane. PeerJ 12(6), 1–20. https://doi.org/10.7717/peerj.17610
Kartikawati, R., Hanudin, E., Purwanto, B.H. 2019. Physico-chemical properties of volcanic soils under different perennial plants from upland area of Mt. Merapi, Indonesia. Planta Tropika: Journal of Agro Science 7(1), 93–102. https://doi.org/10.18196/pt.2019.098.93-102
Lee, J., Lee, S., Young, J.P.W. 2008. Improved PCR primers for the detection and identification of arbuscular mycorrhizal fungi. FEMS Microbiology Ecology 65(2), 339–349. https://doi.org/10.1111/j.1574-6941.2008.00531.x
Lisek, A., Paszt, L., Kulisiewicz, A. 2011. Wykrywanie obecności arbuskularnych grzybów mikoryzowych w korzeniach truskawki technika zagnieżdżonego PCR. Vegetable Crops Research Bulletin 75(1), 91–103. https://doi.org/10.2478/v10032-011-0021-7
Manaroinsong, E., Lolong, A.A. 2016. Identifikasi cendawan mikoriza arbuskular (CMA) pada beberapa tekstur. Buletin Palma 16(2), 203. https://doi.org/10.21082/bp.v16n2.2015.203-210
Mistry, J.T., Bijalwan, A.S., Thakkar, Y.R. 2023. Evaluating the influence of commercial arbuscular mycorrhizal fungi (greenical VAMTM ) on sugarcane growth and yield. Indian Journal of Science and Technology, 16(44), 3971–3977. https://doi.org/10.17485/ijst/v16i44.2499
Morton J.B., Msiska, Z. 2010. Phylogenies from genetic and morphological characters do not support a revision of Gigasporaceae (Glomeromycota) into four families and five genera. Mycorrhiza 20(7), 483-496. https://doi.org/10.1007/s00572-010-0303-9
Nurnasari, E., Djumali. 2019. Determination of soil moisture duration before harvesting that influences the sugarcane content. Jurnal Ilmu Pertanian Indonesia 24(2), 127–134. https://doi.org/10.18343/jipi.24.2.127
Nurtjahyani, S.D., Oktafitria, D., Sriwulan, Ashuri, N.M., Cintamulya, I., Purnomo, E. 2018. Identifikasi dan karakterisasi keanekaragaman mikoriza pada lahan reklamasi bekas penambangan batu kapur di Kabupaten Tuban. Prosiding Seminar Nasional Hayati, 6 (September), 293–299. https://doi.org/10.29407/hayati.v6i1.632
Powell, J.R., Rillig, M.C. 2018. Biodiversity of arbuscular mycorrhizal fungi and ecosystem function. New Phytologist 220(4), 1059–1075. https://doi.org/10.1111/nph.15119
Prayoga, M.H., Prasetya, B. 2021. Eksplorasi mikoriza arbuskula indigenous pada rhizosfer vegetasi lahan pascatambang batubara. Jurnal Tanah dan Sumberdaya Lahan 8(2), 349–357. https://doi.org/10.21776/ub.jtsl.2021.008.2.6
Riajaya, P., Kadarwati, F. 2016. The suitability of sugarcane variety ripe types in heavy textured, rainfed, and smooth drainage land typologies. Buletin Tanaman Tembakau, Serat dan Minyak Industri, 8(2), 85–97. Retrivied from http://ejurnal.litbang.pertanian.go.id/index.php/bultas/article/view/5265/5241
Rini, M.V., Yelli, F., Tambunan, D.L., Damayanti, I. 2021. Morphological and molecular identifications of three native arbuscular mycorrhizal fungi isolated from the rhizosphere of elaeis guineensis and jatropha curcas in Indonesia. Biodiversitas 22(11), 4940–4947. https://doi.org/10.13057/biodiv/d221128
Rosas-Moreno, J., Walker, C., Duffy, K., Krüger, C., Krüger, M., Robinson, C.H., Pittman, J.K. 2023. Isolation and identification of arbuscular mycorrhizal fungi from an abandoned uranium mine and their role in soil-to-plant transfer of radionuclides and metals. Science of the Total Environment 876, 162781. https://doi.org/10.1016/j.scitotenv.2023.162781
Souza, T. 2015. Handbook of Arbuscular Mycorrhizal Fungi. Springer International Publishing. https://doi.org/10.1007/978-3-319-24850-9
Sukarman, S., Dariah, A., Suratman, S. 2020. Tanah vulkanik di lahan kering berlereng dan potensinya untuk pertanian di Indonesia. Jurnal Penelitian dan Pengembangan Pertanian 39(1), 21. https://doi.org/10.21082/jp3.v39n1.2020.p21-34
Sulaeman, Suparto, Eviati. 2005. Petunjuk Teknis Analisis Kimia Tanah, Tanaman, Air, dan Pupuk. Balai Penelitian Tanah. Bogor, Indonesia. Retrivied from https://repository.pertanian.go.id/bitstream/handle/123456789/14959/juknis_kimia.pdf?sequence=1
Taylor, D.L., Walters, W.A., Lennon, N.J., Bochicchio, J., Krohn, A., Caporaso, J.G., Pennanen, T. 2016. Accurate estimation of fungal diversity and abundance through improved lineage-specific primers optimized for Illumina amplicon sequencing. Applied and Environmental Microbiology 82(24), 7217–7226. https://doi.org/10.1128/AEM.02576-16
Wardhika, C.M. 2016. Potensi jamur mikoriza arbuskular unggul dalam peningkatan pertumbuhan dan kesehatan bibit tebu (Saccharum officinarum L.). Ilmu Pertanian 18(2), 84-91. https://doi.org/10.22146/ipas.9088
Yakop, F., Taha, H., Shivanand, P. 2019. Isolation of fungi from various habitats and their possible bioremediation. Current Science 116(5), 733–740. https://doi.org/10.18520/cs/v116/i5/733-740
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